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panda software package  (MathWorks Inc)


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    Structured Review

    MathWorks Inc panda software package
    Panda Software Package, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/panda+software/pm38851538-55-10-15
    Average 90 stars, based on 1 article reviews
    panda software package - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: Effect of vocal respiratory training on respiratory function and respiratory neural plasticity in patients with cervical spinal cord injury: a randomized controlled trial
    Article Snippet: We used PANDA (Pipeline for Analyzing brain Diffusion images) software, based on MATLAB ( http://www.nitrc.org/projects/panda ), to correct the DTI original images for head motion.

    Article Title: Decreased functional connectivity and structural deficit in alertness network with right-sided temporal lobe epilepsy
    Article Snippet: [33] The imaging data of DTI were preprocessed using the PANDA software[34] in MATLAB (Mathworks).

    Imaging:

    Article Title: Decreased functional connectivity and structural deficit in alertness network with right-sided temporal lobe epilepsy
    Article Snippet: .. [ ] The imaging data of DTI were preprocessed using the PANDA software [ ] in MATLAB (Mathworks). ..

    Software:

    Article Title: Decreased functional connectivity and structural deficit in alertness network with right-sided temporal lobe epilepsy
    Article Snippet: .. [ ] The imaging data of DTI were preprocessed using the PANDA software [ ] in MATLAB (Mathworks). ..

    Article Title: A typical antipsychotic treatment induced gradually expanding white matter alterations in healthy individuals with persistent auditory verbal hallucinations-an artificially controlled pilot study.
    Article Snippet: .. Based on a previous study [20], we employed PANDA software [25], a MATLAB toolbox that integrates FSL (https://fsl.fmrib.ox.ac.uk/fsl/fslwiki), Diffusion Toolkit (http://www.trackvis.org/dtk/), and MRIcron (https:// www.nitrc.org/projects/mricron) image processing software. ..

    Article Title: Microstructural abnormalities of white matter in the cingulum bundle of adolescents with major depression and non-suicidal self-injury
    Article Snippet: Background.. Non-suicidal self-injury (NSSI) is prevalent in major depressive disorder (MDD) during adolescence, but the underlying neural mechanisms are unclear.. This study aimed to investigate microstructural abnormalities in the cingulum bundle associated with NSSI and its clinical characteristics.

    Article Title: Cerebral White Matter Changes in Young Healthy Individuals With High Trait Anxiety: A Tract-Based Spatial Statistics Study
    Article Snippet: .. All scans were processed by using the PANDA software , which is a MATLAB toolbox that integrates FSL ( https://fsl.fmrib.ox.ac.uk/fsl/fslwiki ), Diffusion Toolkit ( http://www.trackvis.org/dtk/ ), and MRIcron ( https://www.nitrc.org/projects/mricron ). .. Then, the following steps were performed: (1) Quality check: images that showed excessive movements were considered damaged and of poor quality and were thus removed. (2) Brain extraction and estimate mask: deletion of non-brain tissues and estimation of brain mask. (3) Crop and eddy current/motion correction: the redundant parts of the images were cropped for memory reduction; images were corrected for the elimination of movements and eddy current-induced distortions. (4) DTI metric calculation: diffusion tensor fitting and diffusion metrics, including FA, MD, AD and RD were calculated with FSL DTIFit. (5) Spatial normalization: the diffusion metrics were normalized spatially to Montreal Neurological Institute (MNI) space by FSL FNIRT.

    Article Title: Aberrant topology of white matter networks in patients with methamphetamine dependence and its application in support vector machine-based classification.
    Article Snippet: .. PANDA software, a matlab toolbox for analyzing brain diffusion images, was used to process DTI images. ..

    Article Title: White Matter Abnormalities Based on TBSS and Its Correlation With Impulsivity Behavior of Methamphetamine Addicts
    Article Snippet: .. All scans were processed using the PANDA software , which is a MATLAB toolbox that integrates FSL ( https://fsl.fmrib.ox.ac.uk/fsl/fslwiki ), Diffusion Toolkit ( http://www.trackvis.org/dtk/ ), and MRIcron ( https://www.nitrc.org/projects/mricron ). .. PANDA can automatically process brain diffusion images through the following steps: (1) Image format conversion: The dcm2nii tool in MRIcron was used to convert the DICOM file into a Nifti image. (2) Brain extraction and estimate mask: The deletion of non-brain tissues and estimation of the brain mask. (3) Crop and eddy current/motion correction: The redundant parts of the images were cropped for memory reduction, and the images were corrected for the elimination of movements and eddy current-induced distortions. (4) DTI metric calculation: Diffusion tensor fitting and diffusion metrics, including FA, MD, AD, and RD, were calculated using the FSL DTIFit. (5) Spatial normalization: The diffusion metrics were spatially normalized to the Montreal Neurological Institute (MNI) space through FSL FNIRT.

    Diffusion-based Assay:

    Article Title: A typical antipsychotic treatment induced gradually expanding white matter alterations in healthy individuals with persistent auditory verbal hallucinations-an artificially controlled pilot study.
    Article Snippet: .. Based on a previous study [20], we employed PANDA software [25], a MATLAB toolbox that integrates FSL (https://fsl.fmrib.ox.ac.uk/fsl/fslwiki), Diffusion Toolkit (http://www.trackvis.org/dtk/), and MRIcron (https:// www.nitrc.org/projects/mricron) image processing software. ..

    Article Title: Microstructural abnormalities of white matter in the cingulum bundle of adolescents with major depression and non-suicidal self-injury
    Article Snippet: Background.. Non-suicidal self-injury (NSSI) is prevalent in major depressive disorder (MDD) during adolescence, but the underlying neural mechanisms are unclear.. This study aimed to investigate microstructural abnormalities in the cingulum bundle associated with NSSI and its clinical characteristics.

    Article Title: Cerebral White Matter Changes in Young Healthy Individuals With High Trait Anxiety: A Tract-Based Spatial Statistics Study
    Article Snippet: .. All scans were processed by using the PANDA software , which is a MATLAB toolbox that integrates FSL ( https://fsl.fmrib.ox.ac.uk/fsl/fslwiki ), Diffusion Toolkit ( http://www.trackvis.org/dtk/ ), and MRIcron ( https://www.nitrc.org/projects/mricron ). .. Then, the following steps were performed: (1) Quality check: images that showed excessive movements were considered damaged and of poor quality and were thus removed. (2) Brain extraction and estimate mask: deletion of non-brain tissues and estimation of brain mask. (3) Crop and eddy current/motion correction: the redundant parts of the images were cropped for memory reduction; images were corrected for the elimination of movements and eddy current-induced distortions. (4) DTI metric calculation: diffusion tensor fitting and diffusion metrics, including FA, MD, AD and RD were calculated with FSL DTIFit. (5) Spatial normalization: the diffusion metrics were normalized spatially to Montreal Neurological Institute (MNI) space by FSL FNIRT.

    Article Title: Aberrant topology of white matter networks in patients with methamphetamine dependence and its application in support vector machine-based classification.
    Article Snippet: .. PANDA software, a matlab toolbox for analyzing brain diffusion images, was used to process DTI images. ..

    Article Title: White Matter Abnormalities Based on TBSS and Its Correlation With Impulsivity Behavior of Methamphetamine Addicts
    Article Snippet: .. All scans were processed using the PANDA software , which is a MATLAB toolbox that integrates FSL ( https://fsl.fmrib.ox.ac.uk/fsl/fslwiki ), Diffusion Toolkit ( http://www.trackvis.org/dtk/ ), and MRIcron ( https://www.nitrc.org/projects/mricron ). .. PANDA can automatically process brain diffusion images through the following steps: (1) Image format conversion: The dcm2nii tool in MRIcron was used to convert the DICOM file into a Nifti image. (2) Brain extraction and estimate mask: The deletion of non-brain tissues and estimation of the brain mask. (3) Crop and eddy current/motion correction: The redundant parts of the images were cropped for memory reduction, and the images were corrected for the elimination of movements and eddy current-induced distortions. (4) DTI metric calculation: Diffusion tensor fitting and diffusion metrics, including FA, MD, AD, and RD, were calculated using the FSL DTIFit. (5) Spatial normalization: The diffusion metrics were spatially normalized to the Montreal Neurological Institute (MNI) space through FSL FNIRT.



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